Tracks and Tables

Methylation Data

Methylation Data was exported to the following formats:

Sample summary

This section contains summary metrics for each sample as well as links to exported files. The summary table below contains the following metrics. It is also available as csv file.

Bed files for each sample contain the locations of methylation sites and regions the methylation level (in the score column). The following table links to the files. The files can be quite large in size, so you might want to consider using the "save as" option instead of opening the links directly.

sampleName sites_bigBedFile sites_bedFile sites_num sites_covgMean sites_covgMedian sites_covgPerc25 sites_covgPerc75 sites_numCovg5 sites_numCovg10 sites_numCovg30 sites_numCovg60 tiling1kb_num tiling1kb_covgMean tiling1kb_covgMedian tiling1kb_covgPerc25 tiling1kb_covgPerc75 tiling1kb_numCovg5 tiling1kb_numCovg10 tiling1kb_numCovg30 tiling1kb_numCovg60 tiling1kb_numSitesMean tiling1kb_numSitesMedian tiling1kb_numSites2 tiling1kb_numSites5 tiling1kb_numSites10 tiling1kb_numSites20 cpgislands_num cpgislands_covgMean cpgislands_covgMedian cpgislands_covgPerc25 cpgislands_covgPerc75 cpgislands_numCovg5 cpgislands_numCovg10 cpgislands_numCovg30 cpgislands_numCovg60 cpgislands_numSitesMean cpgislands_numSitesMedian cpgislands_numSites2 cpgislands_numSites5 cpgislands_numSites10 cpgislands_numSites20 genes_num genes_covgMean genes_covgMedian genes_covgPerc25 genes_covgPerc75 genes_numCovg5 genes_numCovg10 genes_numCovg30 genes_numCovg60 genes_numSitesMean genes_numSitesMedian genes_numSites2 genes_numSites5 genes_numSites10 genes_numSites20 promoters_num promoters_covgMean promoters_covgMedian promoters_covgPerc25 promoters_covgPerc75 promoters_numCovg5 promoters_numCovg10 promoters_numCovg30 promoters_numCovg60 promoters_numSitesMean promoters_numSitesMedian promoters_numSites2 promoters_numSites5 promoters_numSites10 promoters_numSites20 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_num X51Hf0xBlxxCt.cssv1.20151105.enhmrg_covgMean X51Hf0xBlxxCt.cssv1.20151105.enhmrg_covgMedian X51Hf0xBlxxCt.cssv1.20151105.enhmrg_covgPerc25 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_covgPerc75 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numCovg5 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numCovg10 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numCovg30 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numCovg60 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSitesMean X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSitesMedian X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSites2 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSites5 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSites10 X51Hf0xBlxxCt.cssv1.20151105.enhmrg_numSites20 ensembleRegBuildBPall_num ensembleRegBuildBPall_covgMean ensembleRegBuildBPall_covgMedian ensembleRegBuildBPall_covgPerc25 ensembleRegBuildBPall_covgPerc75 ensembleRegBuildBPall_numCovg5 ensembleRegBuildBPall_numCovg10 ensembleRegBuildBPall_numCovg30 ensembleRegBuildBPall_numCovg60 ensembleRegBuildBPall_numSitesMean ensembleRegBuildBPall_numSitesMedian ensembleRegBuildBPall_numSites2 ensembleRegBuildBPall_numSites5 ensembleRegBuildBPall_numSites10 ensembleRegBuildBPall_numSites20 ensembleRegBuildBPctcf_num ensembleRegBuildBPctcf_covgMean ensembleRegBuildBPctcf_covgMedian ensembleRegBuildBPctcf_covgPerc25 ensembleRegBuildBPctcf_covgPerc75 ensembleRegBuildBPctcf_numCovg5 ensembleRegBuildBPctcf_numCovg10 ensembleRegBuildBPctcf_numCovg30 ensembleRegBuildBPctcf_numCovg60 ensembleRegBuildBPctcf_numSitesMean ensembleRegBuildBPctcf_numSitesMedian ensembleRegBuildBPctcf_numSites2 ensembleRegBuildBPctcf_numSites5 ensembleRegBuildBPctcf_numSites10 ensembleRegBuildBPctcf_numSites20 ensembleRegBuildBPdistal_num ensembleRegBuildBPdistal_covgMean ensembleRegBuildBPdistal_covgMedian ensembleRegBuildBPdistal_covgPerc25 ensembleRegBuildBPdistal_covgPerc75 ensembleRegBuildBPdistal_numCovg5 ensembleRegBuildBPdistal_numCovg10 ensembleRegBuildBPdistal_numCovg30 ensembleRegBuildBPdistal_numCovg60 ensembleRegBuildBPdistal_numSitesMean ensembleRegBuildBPdistal_numSitesMedian ensembleRegBuildBPdistal_numSites2 ensembleRegBuildBPdistal_numSites5 ensembleRegBuildBPdistal_numSites10 ensembleRegBuildBPdistal_numSites20 ensembleRegBuildBPdnase_num ensembleRegBuildBPdnase_covgMean ensembleRegBuildBPdnase_covgMedian ensembleRegBuildBPdnase_covgPerc25 ensembleRegBuildBPdnase_covgPerc75 ensembleRegBuildBPdnase_numCovg5 ensembleRegBuildBPdnase_numCovg10 ensembleRegBuildBPdnase_numCovg30 ensembleRegBuildBPdnase_numCovg60 ensembleRegBuildBPdnase_numSitesMean ensembleRegBuildBPdnase_numSitesMedian ensembleRegBuildBPdnase_numSites2 ensembleRegBuildBPdnase_numSites5 ensembleRegBuildBPdnase_numSites10 ensembleRegBuildBPdnase_numSites20 ensembleRegBuildBPproximal_num ensembleRegBuildBPproximal_covgMean ensembleRegBuildBPproximal_covgMedian ensembleRegBuildBPproximal_covgPerc25 ensembleRegBuildBPproximal_covgPerc75 ensembleRegBuildBPproximal_numCovg5 ensembleRegBuildBPproximal_numCovg10 ensembleRegBuildBPproximal_numCovg30 ensembleRegBuildBPproximal_numCovg60 ensembleRegBuildBPproximal_numSitesMean ensembleRegBuildBPproximal_numSitesMedian ensembleRegBuildBPproximal_numSites2 ensembleRegBuildBPproximal_numSites5 ensembleRegBuildBPproximal_numSites10 ensembleRegBuildBPproximal_numSites20 ensembleRegBuildBPtfbs_num ensembleRegBuildBPtfbs_covgMean ensembleRegBuildBPtfbs_covgMedian ensembleRegBuildBPtfbs_covgPerc25 ensembleRegBuildBPtfbs_covgPerc75 ensembleRegBuildBPtfbs_numCovg5 ensembleRegBuildBPtfbs_numCovg10 ensembleRegBuildBPtfbs_numCovg30 ensembleRegBuildBPtfbs_numCovg60 ensembleRegBuildBPtfbs_numSitesMean ensembleRegBuildBPtfbs_numSitesMedian ensembleRegBuildBPtfbs_numSites2 ensembleRegBuildBPtfbs_numSites5 ensembleRegBuildBPtfbs_numSites10 ensembleRegBuildBPtfbs_numSites20 ensembleRegBuildBPtss_num ensembleRegBuildBPtss_covgMean ensembleRegBuildBPtss_covgMedian ensembleRegBuildBPtss_covgPerc25 ensembleRegBuildBPtss_covgPerc75 ensembleRegBuildBPtss_numCovg5 ensembleRegBuildBPtss_numCovg10 ensembleRegBuildBPtss_numCovg30 ensembleRegBuildBPtss_numCovg60 ensembleRegBuildBPtss_numSitesMean ensembleRegBuildBPtss_numSitesMedian ensembleRegBuildBPtss_numSites2 ensembleRegBuildBPtss_numSites5 ensembleRegBuildBPtss_numSites10 ensembleRegBuildBPtss_numSites20
51_Hf03_BlCM_Ct_NOMe 51_Hf03_BlCM_Ct_NOMe bigBed bed 18584173 15.1231371985183 13 9 19 18584173 12939308 1250288 23779 2543038 114.615004966501 64 30 133 2543038 2448808 1910800 1343153 6.69914119567112 4 2236149 1385013 605114 138523 27136 1236.00070017689 894 452 1675 27136 27123 27054 26955 57.2236449939287 42 27095 26984 26642 22109 51177 4086.60142251402 911 104 4429 51177 49969 45650 41918 242.685011025462 47 47618 41430 36218 31542 56143 727.436314411414 350 143 1111 56143 55981 54515 51398 36.6116604461111 22 55435 52030 43939 30617 194363 276.282605228361 81 29 248 194363 183423 144421 111861 14.7450336554451 4 162033 106499 68913 39184 504882 231.417166783526 59 25 147 504882 474218 354801 251868 11.6694720514219 4 412880 235268 120169 54807 70821 141.971336185595 76 33 167 70821 68143 55014 40964 6.94835829989007 4 61716 37123 16720 5032 140230 77.4424873422235 46 22 94 140230 131086 91765 56703 4.42467192963109 3 111538 51679 16422 2870 32693 41.7405560823418 25 13 51 32693 27913 14405 6555 2.20565798598656 1 20622 5397 843 70 137993 176.06154660019 99 43 213 137993 134486 115199 91376 10.5934285158205 7 126469 91418 53528 20774 97581 72.0467509043769 34 16 75 97581 87032 52905 30846 3.5027352869438 2 66999 24225 7551 1806 25564 2473.54760600845 2076 1095 3317 25564 25558 25513 25424 127.438076622361 109 25536 25426 25105 24255
51_Hf03_BlCM_Ct_WGBS 51_Hf03_BlCM_Ct_WGBS bigBed bed 25849743 24.4189929470479 23 18 29 25849743 25251373 5784033 289542 2774360 227.814239320059 162 91 281 2774360 2769822 2664176 2416107 9.31819406212143 7 2663041 1941061 924572 236901 27152 1453.12061726576 1104 678 1820 27152 27133 27096 27048 69.8986643117342 51 27119 27066 26946 24425 52977 8081.98112388395 1533 193 8009 52977 52853 49970 46863 330.086639401421 61 49675 43374 38141 33195 56480 1005.98431303116 702.5 361 1522 56480 56404 56168 55846 45.9452532149364 28 56305 55402 50298 36667 213076 469.245424167903 152 58 440 213076 212525 188167 158448 19.1159368017725 6 183560 125086 83064 49507 554947 358.81118737465 123 56 278 554947 553882 491000 405752 14.8721507529912 5 478412 292364 155093 70587 75358 218.944345656732 142 72 273 75358 75203 69903 60573 8.74712917709699 6 69151 45487 21854 7047 153962 154.924832101428 103 53 194 153962 153626 135740 109322 5.85734209485012 4 132075 70700 25297 4959 41722 87.2851493217008 57 30 104 41722 41576 31596 20114 3.23899371069182 2 29729 8686 1552 172 143776 361.332002559537 235 115 455 143776 143640 138329 128291 13.9224267363621 9 137571 109895 70840 31112 114555 119.890873379599 66 33 129 114555 114269 89876 61915 4.53602912993484 3 84320 32071 10177 2503 25574 3497.4101431141 3028 1839.25 4499 25574 25568 25556 25537 158.023025801407 136 25566 25525 25373 24794
51_Hf03_BlEM_Ct_NOMe 51_Hf03_BlEM_Ct_NOMe bigBed bed 19427366 15.285035655374 13 9 20 19427366 13793178 1285797 18509 2597252 117.988490912703 68 31 139 2597252 2509119 1990783 1414935 7.00308439243411 5 2311779 1450723 642183 147440 27129 1214.06188949095 882 459 1636 27129 27108 27050 26959 57.7194318725393 42 27089 26979 26692 22251 51443 4250.25968547713 927 107 4596 51443 50256 46017 42277 252.660660773856 48 47916 41620 36517 31745 56221 726.883708934384 363 154 1111 56221 56088 54897 52042 37.3356623564997 23 55702 52554 44803 31283 197702 284.184135719416 83 29 253 197702 187004 147836 115057 15.2385672195497 5 165273 108874 70644 40426 513570 232.909268454154 61 25 150 513570 483942 365377 260210 11.9806142335037 4 422420 241585 123728 56361 71570 142.097107726701 77 34 168 71570 68887 56200 41956 7.0849525171852 5 62641 37814 17124 5140 142827 79.4684618454494 47 23 96 142827 134230 95455 59475 4.58648538197575 3 114731 53760 17296 3036 34229 42.1795553478045 26 13 52 34229 29435 15275 7117 2.32214171270058 2 21781 5680 877 72 139184 182.138097769859 104 46 221 139184 136053 117970 94358 10.9754559862092 7 128600 94000 55590 21921 100192 72.3754990418397 34 16 76 100192 89774 54958 31866 3.60204188299244 2 69117 24882 7694 1844 25568 2505.05170525657 2089 1123 3327 25568 25563 25519 25438 130.034558248632 111 25550 25449 25147 24348
51_Hf03_BlEM_Ct_WGBS 51_Hf03_BlEM_Ct_WGBS bigBed bed 25809848 23.0259518382286 21 16 27 25809848 24928377 4597771 333298 2773952 214.55237725815 152 85 265 2773952 2767862 2648854 2369010 9.30381643597644 7 2662314 1939588 923044 236188 27152 1345.76830436064 1016 624 1669 27152 27131 27093 27038 69.6009493321559 51 27118 27062 26945 24402 52965 7619.05871802134 1435 182 7545 52965 52805 49704 46486 329.61893363991 61 49662 43367 38131 33180 56473 938.571883909125 659 340 1417 56473 56380 56141 55786 45.7923513699963 28 56279 55382 50281 36612 213035 444.881775295139 143 55 418 213035 212181 185748 155188 19.0952751221386 6 183476 125056 82994 49512 554871 338.162964004246 115 52 263 554871 553226 484672 395257 14.8462094915218 5 478258 292257 154924 70511 75341 204.889555487716 132 67 255 75341 75141 69244 59111 8.7318843459027 6 69126 45462 21774 7018 153926 147.257955121292 98 49 184 153926 153439 134043 106181 5.85468898993896 4 132032 70658 25274 4963 41715 82.9306724199928 54 28 98 41715 41474 30588 18921 3.23731975034077 2 29716 8674 1556 173 143762 341.810701019741 222 108 432 143762 143579 137852 126737 13.9123964299616 9 137575 109866 70789 31063 114550 112.921536446966 61 31 121 114550 114022 87385 58765 4.53249242133872 3 84241 32072 10160 2503 25577 3284.17738593267 2842 1737 4222 25577 25571 25560 25542 157.595465207193 136 25568 25525 25371 24791
51_Hf03_BlTN_Ct_NOMe 51_Hf03_BlTN_Ct_NOMe bigBed bed 21060242 19.0698061304329 17 11 25 21060242 16900582 3329010 77823 2671145 152.887696474733 91 42 183 2671145 2607772 2227520 1724653 7.59171178918529 5 2436500 1589059 716057 164223 27153 1519.75159282584 1111 581 2048 27153 27133 27079 27001 59.0647974390109 43 27117 27010 26755 22600 51988 5561.0942140494 1169 137 5955.25 51988 51144 47553 44098 271.865263197573 51 48472 42180 36976 32156 56375 927.482305986696 482 210 1422 56375 56255 55567 53855 38.9545044487291 24 55984 53692 46586 32758 202846 362.538428167181 106 37 325 202846 195065 161807 130369 16.1226397860291 5 170846 113460 73888 42537 528338 295.796622616583 80 33 196 528338 507483 410304 311464 12.6251077436897 4 440086 255906 131820 59571 72986 182.688268983093 102 45 219 72986 71166 61515 49132 7.42852412550827 5 64742 39849 18127 5448 146996 104.087594220251 63 30 128 146996 141163 110627 77020 4.92413028107344 3 120389 58537 19250 3410 36728 54.0749564365062 33 17 67 36728 33126 19909 10533 2.56371810507688 2 24095 6391 1022 81 141120 241.889066043084 140 62 296 141120 139044 126180 107469 11.7644372462882 8 131937 99169 60048 24232 104936 91.6202351909735 44 21 97 104936 97417 66535 41826 3.80718840377714 2 73368 26485 8120 1919 25572 3203.14167839825 2694 1475 4235.25 25572 25567 25538 25484 135.234206411259 116 25555 25475 25253 24481
51_Hf03_BlTN_Ct_WGBS 51_Hf03_BlTN_Ct_WGBS bigBed bed 25844218 24.5447088010169 23 18 29 25844218 25182024 6104192 283581 2774376 228.946216734862 167 95 284 2774376 2770049 2673088 2441563 9.31619974042848 7 2663207 1941630 924608 236516 27153 1409.95234412404 1077 652 1781 27153 27137 27095 27044 69.8457887184016 51 27122 27058 26938 24423 52979 8081.57802148021 1519 194 7950.5 52979 52857 50097 46946 329.996494468422 61 49682 43370 38140 33190 56465 993.200035420172 698 366 1497 56465 56396 56188 55875 45.9122813224135 28 56290 55400 50301 36657 213093 458.30194328298 153 59 434 213093 212494 189426 159799 19.1036643917428 6 183575 125102 83057 49491 554963 355.71290518467 124 57 279 554963 553874 494465 409942 14.8693903551628 5 478497 292388 155106 70578 75346 216.729501234306 142 73 270 75346 75180 70031 60876 8.74289082263811 6 69152 45486 21820 7039 153961 155.371736998331 105 54 196 153961 153624 136720 110643 5.85882108731894 4 132101 70708 25330 4970 41734 88.4270618680213 59 32 106 41734 41608 32358 20810 3.24116985914819 2 29748 8690 1557 174 143774 363.040028099656 240 118 460 143774 143644 138653 128961 13.9238030362009 9 137600 109912 70843 31092 114573 118.818177057422 67 34 130 114573 114248 91144 63107 4.53535837485627 3 84329 32065 10180 2501 25575 3427.45356793744 2975 1816 4414 25575 25570 25559 25545 157.958365910868 136 25567 25527 25376 24802
51_Hf04_BlCM_Ct_NOMe 51_Hf04_BlCM_Ct_NOMe bigBed bed 15616264 12.0105078910039 10 7 15 15616264 8851698 278555 3198 2372030 85.2522054948715 48 23 99 2372030 2255572 1593843 1001169 5.62926467220093 3 1995072 1150081 476442 111271 27077 787.854821435166 589 336 1027 27077 27067 27013 26866 51.1657651690768 38 27038 26895 26392 21157 49914 2912.9077212806 712 83 3133.75 49914 48394 43602 39609 205.615823894156 40 46319 40159 35193 30613 55595 461.998003417573 253 101 726 55595 55396 52897 48017 31.8291794173315 19 54402 49508 40442 27873 182910 205.874080148707 63 23 186 182910 169704 126279 93809 12.7599151236375 4 150153 96848 61513 34055 470153 165.199911518165 45 19 110 470153 431464 295761 194211 10.0687238288553 3 373763 205115 103311 48112 67158 99.2547723279431 54 25 118 67158 63473 46907 31565 6.07925722838108 4 56763 32537 14252 4182 129516 57.7515442107539 34 17 68 129516 117259 71459 38236 3.73515655913699 2 98354 42186 12691 2202 27789 33.4018496527403 20 11 40 27789 22556 9824 3849 1.79372025731162 1 16782 4169 647 56 132418 127.09026718422 70 32 152 132418 127763 101577 73590 8.95090502140911 5 117756 79976 44225 16263 87743 57.4469758271315 26 13 59 87743 74887 40544 21685 3.07376563643333 2 58614 20919 6632 1612 25529 1595.28066120882 1320 748 2080 25529 25526 25450 25286 111.219155590305 94 25494 25328 24864 23797
51_Hf04_BlCM_Ct_WGBS 51_Hf04_BlCM_Ct_WGBS bigBed bed 25832259 26.7057888742909 26 19 33 25832259 25117375 9211731 181882 2773867 248.999101615182 167 84 315 2773867 2757189 2613663 2325248 9.31188735287466 7 2662026 1938755 922769 235993 27126 1807.75425790754 1368 819 2300.75 27126 27116 27087 27052 70.4056003238032 51 27109 27063 26947 24457 52925 8935.15202645253 1733 219 9095 52925 52740 50175 47275 329.95635047777 61 49638 43367 38142 33182 56428 1208.52656482597 810 390 1865 56428 56377 56151 55757 46.1638688907364 28 56272 55379 50281 36638 213064 537.968929523523 167 61 501 213064 211412 188379 160662 19.1161569556929 6 183451 125070 83046 49503 554813 414.245981979514 133 57 310 554813 551173 490853 410867 14.8982845585073 5 478203 292174 154937 70543 75360 254.327282377919 161 77 318 75360 75009 70031 61584 8.75891710043576 6 69152 45484 21840 7067 153917 169.29545144461 112 54 214 153917 153106 136338 111128 5.85400787498622 4 132013 70626 25241 4957 41690 89.2044615015591 57 28 111 41690 40796 30546 20018 3.23282397111223 2 29687 8665 1545 173 143761 398.884120171674 254 118 505 143761 143426 138002 128105 13.905709559028 9 137562 109817 70766 31047 114525 133.951809648548 71 33 146 114525 113281 90385 64498 4.53484441966619 3 84235 32061 10173 2501 25560 4233.245657277 3636 2202 5451 25560 25555 25551 25534 158.685496481626 136 25554 25521 25372 24798
51_Hf04_BlEM_Ct_NOMe 51_Hf04_BlEM_Ct_NOMe bigBed bed 19101386 15.1679860822665 14 9 20 19101386 13586057 1144243 9041 2579818 116.162720781078 67 31 139 2579818 2491963 1969348 1400281 6.88560739303478 5 2283551 1423695 630216 145148 27104 1063.91565820543 787.5 434 1402.25 27104 27096 27055 26948 56.4975530779703 41 27079 26982 26648 22117 51210 4152.37086506542 910 105 4418 51210 50065 45754 41994 248.488870879587 47 47708 41428 36319 31647 56148 650.261131295861 361.5 150 1002 56148 56025 54752 51777 36.5315833230149 22 55591 52335 44345 31062 195981 276.373975028192 82 29 249 195981 185388 146087 113315 14.9511867233134 5 163519 107562 69615 39692 508490 219.964899998033 59 25 147 508490 478646 358684 254243 11.7226969842564 4 416226 237083 121272 55386 71055 133.633087045247 74 33 162 71055 68360 55152 40740 6.94728546641766 4 61920 37202 16671 5030 141191 78.1677089899498 46 22 95 141191 132404 93177 57753 4.4824175040056 3 112600 52278 16717 2965 33439 42.2121474924489 26 13 51 33439 28807 14971 6871 2.25908123490446 2 21123 5509 858 64 138577 179.042380770258 101 44 217 138577 135221 116410 92667 10.7456556191959 7 127391 92340 54318 21243 98673 71.1970346498029 33 16 74 98673 88306 53464 30804 3.53166486637165 2 67658 24324 7571 1798 25555 2272.36012522011 1876 1048.5 2970 25555 25548 25510 25408 127.176231430805 108 25534 25430 25137 24286
51_Hf04_BlEM_Ct_WGBS 51_Hf04_BlEM_Ct_WGBS bigBed bed 25824905 24.5599627956037 24 18 30 25824905 25111364 6754833 62156 2773849 228.940787692481 158 82 291 2773849 2760170 2618978 2322981 9.30924050122367 7 2662207 1938989 922790 235972 27123 1582.71614496921 1199 722 2008.5 27123 27110 27085 27040 70.1805938845347 51 27104 27062 26939 24439 52919 8192.40420264933 1560 200 8269.5 52919 52766 50001 47008 329.854765449782 61 49644 43364 38122 33181 56435 1076.38371577921 732 365 1650 56435 56361 56148 55750 46.0515451152424 28 56272 55377 50295 36640 213078 489.246801640714 155 57 457 213078 211725 186866 158099 19.1117398249074 6 183501 125047 83047 49528 554858 374.469168688205 124 55 283 554858 551829 487270 403765 14.8854128990115 5 478256 292189 154999 70516 75377 228.918595858153 148 73 287 75377 75066 69687 60706 8.75245360988596 6 69171 45462 21858 7033 153929 155.065042974358 104 52 197 153929 153218 135243 108901 5.85450735928489 4 132040 70623 25270 4961 41691 82.7924252236694 54 28 103 41691 41049 30241 19279 3.2318913360595 2 29679 8651 1554 172 143748 366.042873639981 237 113 463 143748 143463 137820 127396 13.9080242451204 9 137539 109864 70769 31056 114550 121.212116979485 66 32 133 114550 113476 88725 61944 4.53555001916443 3 84272 32066 10176 2501 25563 3782.75366740993 3249 1979 4867 25563 25557 25554 25539 158.407271305708 136 25555 25523 25372 24793
51_Hf04_BlTN_Ct_NOMe 51_Hf04_BlTN_Ct_NOMe bigBed bed 19345622 15.1463957581721 13 9 20 19345622 13769344 1161314 8316 2606611 116.174721889841 69 32 139 2606611 2521823 2019408 1443988 6.97363159570223 5 2324206 1457070 636769 143729 27106 1088.6753486313 807 441 1437 27106 27094 27040 26946 56.485373661552 41 27076 26980 26628 22111 51380 4154.84188400156 923 108 4403 51380 50256 46037 42277 250.6720820219 47 47916 41597 36405 31718 56205 657.464691753403 363 156 1019 56205 56088 54932 52236 36.5903100843755 22 55695 52702 44735 31053 197780 272.916386894529 82 29 247 197780 187440 148213 115185 15.0053726924824 5 165232 108422 70144 39888 513827 219.683553024656 61 26 149 513827 484865 366705 261084 11.7938105186633 4 422076 240612 122685 55785 71559 134.592825500636 76 34 163 71559 69005 56194 41762 6.99223851339717 4 62572 37507 16747 5041 142802 78.8289519754625 48 23 96 142802 134296 95876 59629 4.54747371220623 3 114367 53358 16991 2949 34297 42.7327171472724 26 14 52 34297 29672 15516 7284 2.32039601119162 2 21858 5633 897 69 139307 180.804116088926 105 47 221 139307 136260 118315 95041 10.8864344102764 7 128639 94000 55269 21592 100305 71.6656796769852 34 16 75 100305 90082 55286 31935 3.57583887940346 2 69104 24672 7624 1805 25557 2275.29725711155 1906 1074 2982 25557 25550 25518 25433 127.106176700547 108 25536 25442 25157 24329
51_Hf04_BlTN_Ct_WGBS 51_Hf04_BlTN_Ct_WGBS bigBed bed 25862502 24.5408071887244 24 19 30 25862502 25265182 6526597 61707 2774117 229.082895566409 166 89 296 2774117 2766415 2645027 2379661 9.32279562271957 7 2663097 1941491 925323 237515 27119 1326.4520078174 1017 619 1680.5 27119 27105 27080 27029 69.8236008389447 51 27099 27049 26935 24424 52922 8093.49397226106 1516 203 8016 52922 52816 50191 47158 330.217097947568 61 49644 43358 38124 33186 56430 995.446500088605 731 378 1502 56430 56369 56156 55810 45.9355420727717 28 56266 55391 50292 36672 213063 470.880523601001 156 60 450 213063 212239 188779 159952 19.1264058233054 6 183549 125147 83085 49541 554996 360.130305443643 128 58 285 554996 553541 493538 411559 14.8784039358163 5 478498 292444 155133 70609 75379 220.529059817721 149 76 282 75379 75205 70259 61602 8.75547343743792 6 69203 45514 21867 7063 153962 156.587443654928 108 55 201 153962 153619 136957 111440 5.86127958795789 4 132081 70742 25323 4979 41739 85.2696039675124 58 30 107 41739 41434 31520 20420 3.23904153813043 2 29732 8682 1560 170 143773 369.104442419648 246 119 472 143773 143615 138555 128922 13.9280083968192 9 137600 109897 70832 31106 114582 116.566554956276 68 33 133 114582 114111 90696 63637 4.5356893968431 3 84329 32090 10179 2500 25561 3487.98376432847 3011 1851 4482 25561 25557 25551 25538 158.080570758405 136 25553 25519 25372 24791
51_Hf05_BlTA_Ct_NOMe 51_Hf05_BlTA_Ct_NOMe bigBed bed 19381250 14.8947439922606 13 9 19 19381250 13831007 918742 6557 2612944 114.143744756872 70 33 140 2612944 2530646 2034201 1455961 6.98647656870074 5 2332504 1462311 639713 143491 27102 992.359973433695 734 410 1304.75 27102 27095 27043 26931 55.8449792103617 41 27078 26954 26604 22031 51401 4076.04486294041 891 106 4324 51401 50267 46011 42265 251.12829114759 48 47867 41580 36441 31697 56185 618.731850137937 360 156 955 56185 56058 54950 52282 36.4137760246228 23 55671 52701 44822 31162 197846 266.383242521962 81 29 243 197846 187702 148108 114593 15.0247509216018 5 165100 108479 70154 39925 514575 210.962635184375 61 26 146 514575 486023 367738 260619 11.7731057354733 4 422406 240788 122631 55728 71627 127.623424127773 74 34 157 71627 69079 56187 41393 6.96325876478457 4 62537 37603 16707 4976 143095 77.528921345959 48 23 95 143095 134706 96249 59704 4.55290965821003 3 114644 53392 17033 2940 34463 42.3222876708354 27 14 52 34463 29948 15791 7324 2.32780926417486 2 21913 5642 879 68 139399 178.159197698692 105 47 220 139399 136385 118772 95341 10.8967914141133 7 128717 94078 55296 21628 100436 68.986837388984 34 17 74 100436 90355 55222 31425 3.56800759608349 2 69060 24630 7578 1794 25555 2156.06671884171 1811 1035.5 2814 25555 25550 25517 25432 126.67392494136 108 25535 25443 25138 24322

Tracks Hubs

Track Hub data was generated for export to various genome browsers. Note that you need a server that is capable of serving the tracks to the genome browser via URL. Below, instructions are provided to view the tracks in the UCSC genome browser. Of course the files can also be viewed in other browsers such as the Ensembl genome browser.

  1. Make sure you are viewing this report via the internet and not locally (simply look at the URL in the address line of your browser). If this is not the case, copy the files belonging to this report to a directory which is accessible via the internet and enter the corresponding URL in your browser. If you don't want to copy the entire report, it suffices to copy the track hub directories (see table(s) below).
  2. Make sure the hg19 subdirectories in the track hub directory (for its location be referred to the table(s) below) contain all the required bigBed/bigWig files
  3. Go to the UCSC hub connection website to the "My Hubs" tab and add the web-URL of the hub.txt file in the directory you just copied. Hint: You can use the copy link functionality of your browser (right mouse click) on the track hub txt column in the table(s) below. Don't forget to click on "Load Selected Hubs".
  4. Make sure you are looking at the correct genome (hg19). The loaded hubs should now appear below the browsing window where you can modify their display settings.
More information on UCSC track hubs can be found here. Below, you find table(s) containing the directory names for the bed/bedGraph and track hub directories for all exported data, site and region types.

bigBed