Data Import

Loading

This section presents a summary of the data import step.

Data type .idat files
Data source C:\RnBeads\data\Ziller2011_PLoSGen_450K\dataset\idat
Number of samples 12
Number of probes 485577
Detection p-values present
bead counts information is present
Quality control information absent

Sample Annotation

The loaded dataset includes a table of sample annotations describing the following traits:

No. Trait Missing Values Type
1 Sample_ID identifiers or text
2 Sentrix_ID all identical
3 Sentrix_Position identifiers or text
4 Sample_Plate all identical
5 Sample_Well identifiers or text
6 Sample_Group categories or text
7 Cell_Line categories or text
8 Passage_No numbers
9 Treatment 8 categories or text
10 CellType 8 categories or text
11 barcode identifiers or text
12 Predicted Male Probability numbers or identifiers
13 Predicted Gender categories or text

The full sample annotation table is available as a comma-separated value file accompanying this report.